Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTGATGAGGTGGTACGGCTGCTCAACTGCAGTGACTTTGCAT
.((((((((((((((...(((&.)))...)))))))))).....)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_018668
GeneSymbolVPS33B
Binding site1951,1996
Score0.923
Seed1
Au0.529
Energy-21.0
Binding len27
Me-4.026
Phylopstem3.980037052631579
Phylopflank3.1988355954999994
Longest consecutive pairings10
Position of longest consecutive pairings10
Pairings in 3prime end5
PositionCDS
2D Structure