Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCAGAGAGCTAGTGTTTATTTTCTCCATTGTGTTACACACTTGTGCAGCTGCAAC
((((((((((((((((((.(.&.).))))).)))...)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_018672
GeneSymbolABCA5
Binding site569,625
Score1.0
Seed1
Au0.515
Energy-22.5
Binding len26
Me-3.938
Phylopstem0.1004704927272727
Phylopflank-0.13398129825000007
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end6
Position5UTR
2D Structure