Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGACATGGTAGACATCCTCAACCGCACTGGCCACCAGCTCGCCGACATGCTTAAGAGCTGCAAC
(((((((((((((((..(((.&.)))))))))))..............................))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_018674
GeneSymbolASIC4
Binding site719,786
Score0.846
Seed1
Au0.412
Energy-22.5
Binding len50
Me-4.171
Phylopstem3.983744787555555
Phylopflank3.0477781610000005
Longest consecutive pairings11
Position of longest consecutive pairings38
Pairings in 3prime end5
PositionCDS
2D Structure