Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTGCCCAGCAGCAGTT
..((.(((((((..(((((((&))))))))).))))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_018676
GeneSymbolTHSD1
Binding site1814,1833
Score0.846
Seed0
Au0.471
Energy-19.4
Binding len19
Me-11.222
Phylopstem1.8956897714285714
Phylopflank3.2903619187499995
Longest consecutive pairings9
Position of longest consecutive pairings10
Pairings in 3prime end7
PositionCDS
2D Structure