Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCAGCGCTACCGCGAGCTGCAC
.((((((((((((.((...((&))...)).))))).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_018677
GeneSymbolACSS2
Binding site165,187
Score0.827
Seed1
Au0.265
Energy-22.3
Binding len22
Me-4.65
Phylopstem1.6003775384615386
Phylopflank2.3590513399999997
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure