Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTGTCAGCCCAGCCTGGGTGCACAGTAGCTGCAAC
(((((((((((((((..((((&))))..)))))...............)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_018689
GeneSymbolCEMIP
Binding site5941,5978
Score0.846
Seed1
Au0.397
Energy-25.6
Binding len37
Me-4.171
Phylopstem-0.9586091833333333
Phylopflank-0.14464155000000004
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure