Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTATATAGAGGCATTTATTGGTAAATTATAATCAGCAGTTGCAC
.(((((((((((((((((...&.)))))))).))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_018699
GeneSymbolPRDM5
Binding site4624,4669
Score1.0
Seed1
Au0.676
Energy-21.7
Binding len20
Me-3.793
Phylopstem0.8552280888888888
Phylopflank2.31257711875
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure