Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&ATCTAAATTGTGTGTCTGTTTTTGAAAGGTG
((((((((((((((.(((((..&))))).))))))))))..........)))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_018700
GeneSymbolTRIM36
Binding site3618,3649
Score0.885
Seed1
Au0.706
Energy-17.7
Binding len31
Me-4.673
Phylopstem3.4307924583333325
Phylopflank3.6158980407499994
Longest consecutive pairings10
Position of longest consecutive pairings15
Pairings in 3prime end5
Position3UTR
2D Structure