Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTTCAGGGCCTTACCAGCTGACAAG
(((((((((.....(((((((&.))))))))))))).))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001365389
GeneSymbolOR4N4C
Binding site871,898
Score0.935
Seed1
Au0.559
Energy-18.8
Binding len19
Me-13.498
Phylopstem5.6742028300000005
Phylopflank5.1308536375000005
Longest consecutive pairings13
Position of longest consecutive pairings5
Pairings in 3prime end7
PositionCDS
2D Structure