Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&AGCTTGCAAGCTGCCAAGTTGCAAC
(((((((((((((((((((.(&).))))))).))))..)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_018704
GeneSymbolCTTNBP2NL
Binding site3845,3870
Score0.923
Seed1
Au0.574
Energy-22.0
Binding len25
Me-3.938
Phylopstem0.3369784818181818
Phylopflank0.3014959712499999
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end7
Position3UTR
2D Structure