Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGGGCACCTGCAGCGGCAT
.(((.(((((((.(((.((((&))))..))).))))))).))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_018711
GeneSymbolSVOP
Binding site1578,1600
Score0.846
Seed0
Au0.309
Energy-23.9
Binding len22
Me-9.201
Phylopstem-0.06413
Phylopflank-0.1883592
Longest consecutive pairings7
Position of longest consecutive pairings5
Pairings in 3prime end7
PositionCDS
2D Structure