Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTCATAACCCAGCTCTGCAAA
(((((((((.((((((.((((&)))).)))))))))))..)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_018711
GeneSymbolSVOP
Binding site6254,6277
Score0.833
Seed1
Au0.456
Energy-22.8
Binding len23
Me-5.18
Phylopstem4.688979545454546
Phylopflank4.535102405000001
Longest consecutive pairings11
Position of longest consecutive pairings7
Pairings in 3prime end7
Position3UTR
2D Structure