Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCCAGGAAGCAGCTGCT
..((((((((..(((...(((&))))))...)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001365399
GeneSymbolPPOX
Binding site1320,1338
Score0.846
Seed1
Au0.441
Energy-19.0
Binding len18
Me-11.362
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure