Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCCAGAACCGGGCGCTGCAGCTGCT
..((((((((((.(((..(((&.)))..))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_018714
GeneSymbolCOG1
Binding site2418,2444
Score0.923
Seed1
Au0.485
Energy-25.8
Binding len20
Me-6.246
Phylopstem3.4635476700000005
Phylopflank2.02790920625
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure