Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCCAGCAGCCACAGCAGCC
..((.((((.((((((..(((&)))..)))))).)))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_018714
GeneSymbolCOG1
Binding site321,341
Score0.872
Seed0
Au0.294
Energy-21.9
Binding len20
Me-10.319
Phylopstem2.5015793333333334
Phylopflank2.2168716749999997
Longest consecutive pairings6
Position of longest consecutive pairings9
Pairings in 3prime end6
PositionCDS
2D Structure