Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTCAGCCTTCTCTCTGCTGCGT
.((((((...(((((.(((((&))))))))))........)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_018724
GeneSymbolIL20
Binding site112,137
Score0.923
Seed1
Au0.5
Energy-18.8
Binding len25
Me-8.639
Phylopstem0.3735165166666667
Phylopflank0.90143914
Longest consecutive pairings10
Position of longest consecutive pairings15
Pairings in 3prime end7
PositionCDS
2D Structure