Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CTTTGCAAGACACAAAGCCTGCGAATCGATGCTGCC
..(((((..(((((...((((&.))))...)))))..))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_018724
GeneSymbolIL20
Binding site302,338
Score0.846
Seed0
Au0.5
Energy-18.8
Binding len21
Me-9.296
Phylopstem1.3412194
Phylopflank1.3891530687500002
Longest consecutive pairings5
Position of longest consecutive pairings8
Pairings in 3prime end5
PositionCDS
2D Structure