Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CTTGGGGGCAGCTGCGGA
((((((((((..((.((((..&)))).)))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_018727
GeneSymbolTRPV1
Binding site181,199
Score0.846
Seed1
Au0.397
Energy-19.9
Binding len18
Me-10.845
Phylopstem-0.27086982
Phylopflank0.10388883125
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure