Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTGGAGCTGGCTGCTGGTGGGGTACGGGGCTGCGGG
((((((((.(((((.(((((.&))))).))).................)).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_018833
GeneSymbolTAP2
Binding site382,420
Score0.846
Seed1
Au0.324
Energy-21.2
Binding len38
Me-5.729
Phylopstem0.2880257845
Phylopflank0.16733176695000002
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure