Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTGCAGACTTTCATTTGGAGTTTGAACCCGTTTTGGTTGCAT
.((((((((((((((((((((&))))))))).....................))))...))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_018834
GeneSymbolMATR3
Binding site3213,3258
Score0.923
Seed1
Au0.647
Energy-21.3
Binding len45
Me-3.793
Phylopstem2.0367858479545458
Phylopflank1.7718882213749998
Longest consecutive pairings9
Position of longest consecutive pairings36
Pairings in 3prime end8
Position3UTR
2D Structure