Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&ATGTACTTTGTGTGTCGGTGG
.((((((((((((.(((.((..&)).))).))))))))))).).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_018836
GeneSymbolAJAP1
Binding site5157,5178
Score0.846
Seed1
Au0.529
Energy-18.3
Binding len21
Me-4.65
Phylopstem-0.9811151846153847
Phylopflank-0.89096336625
Longest consecutive pairings11
Position of longest consecutive pairings3
Pairings in 3prime end5
Position3UTR
2D Structure