Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&GTGGGTGGGGGGCGGGGG
...((((((..(((.(((((.&))))).)))..)))))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_018836
GeneSymbolAJAP1
Binding site11895,11913
Score0.846
Seed0
Au0.456
Energy-27.4
Binding len18
Me-11.317
Phylopstem-0.28882266666666667
Phylopflank0.710426241875
Longest consecutive pairings6
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure