Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCGCCTCAGCCGCAGCTGG
...((((((((((((...(((&)))....)))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_018840
GeneSymbolRAB5IF
Binding site199,219
Score0.846
Seed0
Au0.265
Energy-27.6
Binding len20
Me-6.748
Phylopstem2.302575808333333
Phylopflank3.20690415
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure