Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTAGGTTTGCCAGGA
.(((((((...(((.((((...&)))).)))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_018843
GeneSymbolSLC25A40
Binding site218,234
Score0.846
Seed1
Au0.353
Energy-18.0
Binding len16
Me-9.652
Phylopstem0.08360614285714285
Phylopflank-0.04687654349999998
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end4
Position5UTR
2D Structure