Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTCTAGGTTTGCCAGGACTGCCGGCCCTGCAGCTGCC
..((((((((((..((..(((&.))).)).)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_018843
GeneSymbolSLC25A40
Binding site214,254
Score0.846
Seed1
Au0.412
Energy-22.6
Binding len19
Me-7.103
Phylopstem-0.030931799999999975
Phylopflank-0.08483906475
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end5
Position5UTR
2D Structure