Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTGGACTGTTTGACTGCAAA
(((((((.((((((.((((((&))))))))))))..).)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_018848
GeneSymbolMKKS
Binding site2501,2524
Score0.923
Seed1
Au0.471
Energy-19.4
Binding len23
Me-6.987
Phylopstem3.5513192374999996
Phylopflank2.3855992787500004
Longest consecutive pairings12
Position of longest consecutive pairings11
Pairings in 3prime end7
PositionCDS
2D Structure