Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TGCAGCCAAAGCTGCC
..((((((..(((((((....&)))))))..)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_018849
GeneSymbolABCB4
Binding site3511,3527
Score0.885
Seed1
Au0.544
Energy-20.8
Binding len16
Me-7.256
Phylopstem5.705851428571428
Phylopflank3.07496242875
Longest consecutive pairings7
Position of longest consecutive pairings9
Pairings in 3prime end4
PositionCDS
2D Structure