Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TGCAGCCAAAGCTGCC
..((((((..(((((((....&)))))))..)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_018850
GeneSymbolABCB4
Binding site3349,3365
Score0.846
Seed1
Au0.544
Energy-20.8
Binding len16
Me-7.256
Phylopstem2.9556901142857144
Phylopflank2.5139546825000005
Longest consecutive pairings7
Position of longest consecutive pairings9
Pairings in 3prime end4
PositionCDS
2D Structure