Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCATCAGCAGCTGCT
..((((((((...(((.....&)))...)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_018850
GeneSymbolABCB4
Binding site3676,3691
Score0.923
Seed1
Au0.485
Energy-19.4
Binding len15
Me-12.418
Phylopstem0.833
Phylopflank0.58921747425
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure