Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&ACCCAGGAAGTGGAGGTTGCAGTGA
(((((.(((((((((((((...&)))))))))..))))....))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001330742
GeneSymbolCD84
Binding site3249,3274
Score0.846
Seed0
Au0.441
Energy-23.1
Binding len25
Me-5.839
Phylopstem-0.013121266666666671
Phylopflank-0.05038610999999997
Longest consecutive pairings9
Position of longest consecutive pairings16
Pairings in 3prime end5
Position3UTR
2D Structure