Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTAAGCAGCTGCAGGAGTTTGTGGCTGAGGGTGGGGGGCTGCT
..((((((((((((((..(((&)))..)))))))))........................))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001365428
GeneSymbolTCAF2
Binding site453,497
Score0.846
Seed1
Au0.309
Energy-20.5
Binding len44
Me-4.957
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings30
Pairings in 3prime end6
PositionCDS
2D Structure