Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTACATTGTAGGTTGTGATCATTTTGCCC
....((((((((((((((....&))))))))))..............)))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_018898
GeneSymbolPCDHAC1
Binding site5623,5652
Score0.846
Seed0
Au0.559
Energy-15.6
Binding len29
Me-9.547
Phylopstem2.5123624999999996
Phylopflank2.6258688250000004
Longest consecutive pairings10
Position of longest consecutive pairings19
Pairings in 3prime end4
Position3UTR
2D Structure