Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTGCAGAACTGTACAAACAAGCCAACAACAATATTGATGCCAGGA
.((((((((.((((((......&.)))))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_018899
GeneSymbolPCDHAC2
Binding site2548,2593
Score1.0
Seed1
Au0.529
Energy-20.0
Binding len16
Me-5.036
Phylopstem1.64978875
Phylopflank2.1596681625
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end2
PositionCDS
2D Structure