Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CTTATTACTGACTGCCACTGATGGGGGCAAACCGGAGCTGCAAG
((((((((.(((((((.....&.)))).))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_018900
GeneSymbolPCDHA1
Binding site777,821
Score0.923
Seed1
Au0.426
Energy-23.9
Binding len19
Me-4.994
Phylopstem1.0451880000000002
Phylopflank0.9558664687500004
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure