Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TTGCAGCCGGCGGCGGGCGGC
((((.(((((((((((((...&))))))))).))))..)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_018902
GeneSymbolPCDHA11
Binding site1974,1995
Score0.846
Seed0
Au0.324
Energy-22.2
Binding len21
Me-8.057
Phylopstem0.17388452142857136
Phylopflank1.7489101374999998
Longest consecutive pairings9
Position of longest consecutive pairings12
Pairings in 3prime end5
PositionCDS
2D Structure