Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTGTACACTGCGCTGCGGT
(((((((.((((.((((.(((&))).))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_018905
GeneSymbolPCDHA2
Binding site2260,2280
Score0.846
Seed1
Au0.309
Energy-20.6
Binding len20
Me-7.54
Phylopstem0.5298926285714287
Phylopflank0.11709632999999997
Longest consecutive pairings15
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure