Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&GGTGGGGAGCTGGTCATACTCGCAGCAGAGGCAGCAGAGGG
...((((((.(((((((((((&)))))).....................))))).)))).)).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_018906
GeneSymbolPCDHA3
Binding site2372,2413
Score0.846
Seed0
Au0.368
Energy-25.1
Binding len41
Me-7.757
Phylopstem1.041195979375
Phylopflank0.6323355919999999
Longest consecutive pairings6
Position of longest consecutive pairings35
Pairings in 3prime end8
PositionCDS
2D Structure