Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&TGGGCAGCAACGTGACGCTGCAGGTGTTC
.(((((((((((((.((((..&)))).)).........)))))))).))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_018906
GeneSymbolPCDHA3
Binding site1774,1803
Score0.846
Seed1
Au0.324
Energy-22.4
Binding len29
Me-4.529
Phylopstem1.31241932173913
Phylopflank1.5119346475000002
Longest consecutive pairings8
Position of longest consecutive pairings5
Pairings in 3prime end5
PositionCDS
2D Structure