Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCGCTGCAGCCGCTGGACCACGAGGAGCTAGAGCTGCT
..(((((((((((((((..((&))..)))))))))..................)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_018906
GeneSymbolPCDHA3
Binding site1695,1733
Score0.846
Seed1
Au0.309
Energy-23.7
Binding len38
Me-4.957
Phylopstem1.5488199757575758
Phylopflank1.3704668700000002
Longest consecutive pairings9
Position of longest consecutive pairings25
Pairings in 3prime end6
PositionCDS
2D Structure