Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTTTGGTGCTCACGCTGCTGCTGTACACCGCGCTGCGGT
(((((((.((((.((((.(((&.))).))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_018907
GeneSymbolPCDHA4
Binding site2245,2287
Score0.923
Seed1
Au0.309
Energy-23.0
Binding len21
Me-7.54
Phylopstem1.531872285714286
Phylopflank0.8029897699999999
Longest consecutive pairings15
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure