Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGCTGGTGCTCACGCTGCTGCTGTACACCGCGCTGCGGT
(((((((.((((.((((.(((&.))).))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_018908
GeneSymbolPCDHA5
Binding site2285,2327
Score0.923
Seed1
Au0.279
Energy-23.0
Binding len21
Me-7.54
Phylopstem0.45641687142857135
Phylopflank0.7838565187500001
Longest consecutive pairings15
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure