Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTGTACACTGCGCTGCGGT
(((((((.((((.((((.(((&))).))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_018911
GeneSymbolPCDHA8
Binding site2282,2302
Score0.846
Seed1
Au0.324
Energy-20.6
Binding len20
Me-7.54
Phylopstem0.3466675
Phylopflank0.22379325750000012
Longest consecutive pairings15
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure