Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCGGCCGCGGTCTCCTGCGT
.(((((((((((((((.....&))))))))))....))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_018912
GeneSymbolPCDHGA1
Binding site2259,2279
Score0.846
Seed1
Au0.324
Energy-21.1
Binding len20
Me-3.793
Phylopstem0.746858052631579
Phylopflank0.5891993525000001
Longest consecutive pairings10
Position of longest consecutive pairings10
Pairings in 3prime end3
PositionCDS
2D Structure