Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTGCAACTGCGGGGCAGA
((((..((((((((((((((.&)))))))))))))).)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_018914
GeneSymbolPCDHGA11
Binding site715,735
Score0.962
Seed0
Au0.5
Energy-27.2
Binding len20
Me-9.958
Phylopstem0.18249871428571426
Phylopflank0.8681729725
Longest consecutive pairings14
Position of longest consecutive pairings6
Pairings in 3prime end7
PositionCDS
2D Structure