Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTCGACTATGAGCAGTTTAGAGACCTGCAGCTGCT
..(((((((((((((.((((.&)))))))))...................)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_018917
GeneSymbolPCDHGA4
Binding site1735,1772
Score0.923
Seed1
Au0.456
Energy-22.1
Binding len37
Me-5.19
Phylopstem1.3327826718750009
Phylopflank1.601945675
Longest consecutive pairings9
Position of longest consecutive pairings28
Pairings in 3prime end6
PositionCDS
2D Structure