Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCCCAGGGTGGGACTGCCGGC
..(((((((((((((((((...&)))))))).))))..))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001365479
GeneSymbolUSP40
Binding site3400,3421
Score0.885
Seed1
Au0.353
Energy-23.9
Binding len21
Me-4.957
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings13
Pairings in 3prime end5
PositionCDS
2D Structure