Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AGTCCTTCACCTTGCCAGGTG
((((((((..............&.)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_018918
GeneSymbolPCDHGA5
Binding site4231,4252
Score0.923
Seed1
Au0.382
Energy-14.9
Binding len10
Me-15.523
Phylopstem0.5135558125
Phylopflank0.35502070624999993
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end0
Position3UTR
2D Structure