Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&GGTTGGGGAGGCAGGGAGCTAGGGCAGGGA
...((((((.(((((((((((&))).))))))))...........)))))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_018918
GeneSymbolPCDHGA5
Binding site4132,4162
Score1.0
Seed0
Au0.412
Energy-27.5
Binding len30
Me-7.757
Phylopstem1.9067566999999999
Phylopflank1.4349896112500002
Longest consecutive pairings8
Position of longest consecutive pairings18
Pairings in 3prime end8
Position3UTR
2D Structure