Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTCCGCAGAGGCATCCGCAGCGCAGC
((((.(((((((.(((.....&.))).))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_018919
GeneSymbolPCDHGA6
Binding site198,226
Score1.0
Seed0
Au0.309
Energy-21.7
Binding len17
Me-9.346
Phylopstem0.7924874142857145
Phylopflank-0.05099668124999997
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure