Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTACAGCTGTGGGTGACAGC
(((((.((((((((((.((((&)))))))))))))).)).))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_018919
GeneSymbolPCDHGA6
Binding site1772,1794
Score0.846
Seed0
Au0.397
Energy-21.5
Binding len22
Me-5.839
Phylopstem0.4632421000000001
Phylopflank1.2869062864999998
Longest consecutive pairings14
Position of longest consecutive pairings8
Pairings in 3prime end7
PositionCDS
2D Structure